Explain below configuration:-

--num-executors 10 
--executor-cores 4
--executor-memory 16g
--driver-memory 16g
--conf spark.executor.memoryOverhead=2048
--conf spark.driver.memoryOverhead=2048
--conf spark.shuffle.service.enabled=true
--conf spark.dynamicAllocation.enabled=true
--conf spark.dynamicAllocation.minExecutors=5
--conf spark.dynamicAllocation.maxExecutors=15
--conf spark.sql.shuffle.partitions=200
--conf spark.sql.broadcastTimeout=36000
--conf spark.sql.autoBroadcastJoinThreshold=100000000

The provided Spark configuration outlines how you want to allocate resources and configure the execution behavior for a Spark job. Let me break it down:

Core Spark Configuration:

  1. --num-executors 10:
    • Specifies that you want to start with 10 executors for your Spark job.
    • Since dynamic allocation is enabled, this acts as the initial number of executors.
  2. --executor-cores 4:
    • Each executor will get 4 CPU cores.
    • This means each executor can run 4 tasks concurrently.
  3. --executor-memory 16g:
    • Each executor will be allocated 16 GB of memory.
    • This memory will be used for data processing by the tasks assigned to that executor.
  4. --driver-memory 16g:
    • The driver (which manages the Spark job) will have 16 GB of memory allocated.
    • This is critical for managing large datasets and broadcast joins if they occur on the driver.

Memory Overhead:

  1. --conf spark.executor.memoryOverhead=2048:
    • This adds an additional 2 GB for off-heap memory for each executor.
    • Memory overhead is used for things like shuffle buffers, user data structures, etc.
  2. --conf spark.driver.memoryOverhead=2048:
    • This adds an additional 2 GB of overhead memory for the driver.

Dynamic Allocation:

  1. --conf spark.shuffle.service.enabled=true:
    • This enables external shuffle service, which allows executors to be removed without losing shuffle data. This is crucial for dynamic allocation.
  2. --conf spark.dynamicAllocation.enabled=true:
    • Dynamic allocation allows Spark to add or remove executors based on the workload.
    • Executors are added when there are pending tasks and removed when they are no longer needed.
  3. --conf spark.dynamicAllocation.minExecutors=5:
    • Sets the minimum number of executors Spark will allocate when using dynamic allocation to 5.
  4. --conf spark.dynamicAllocation.maxExecutors=15:
  • Sets the maximum number of executors that can be allocated dynamically to 15.
  • Depending on the workload, Spark will scale between 5 and 15 executors.

Shuffle and Join Configurations:

  1. --conf spark.sql.shuffle.partitions=200:
  • Sets the number of shuffle partitions to 200 for operations like joins and aggregations.
  • This is useful for distributing the shuffle data evenly across executors.
  1. --conf spark.sql.broadcastTimeout=36000:
  • Increases the timeout for broadcast joins to 36,000 seconds (10 hours).
  • This is useful when dealing with very large datasets in broadcast joins, where it might take longer to broadcast the data to all executors.
  1. --conf spark.sql.autoBroadcastJoinThreshold=100000000:
  • Sets the threshold for broadcast joins to 100 MB.
  • Any table smaller than 100 MB will be automatically broadcast to all executors, allowing for faster joins.

What Does This Mean for Your Job?

  • Executor Setup:
    • You are starting with 10 executors, each having 4 CPU cores and 16 GB of memory, plus 2 GB of memory overhead.
    • Each executor can run 4 tasks concurrently.
  • Dynamic Allocation:
    • Dynamic allocation will adjust the number of executors based on the workload, with a minimum of 5 executors and a maximum of 15.
    • This ensures resources are used efficiently, scaling up when the job is resource-intensive and scaling down when tasks are fewer.
  • Shuffle Configuration:
    • By setting spark.sql.shuffle.partitions=200, you are distributing the shuffle data across 200 partitions. This balances the shuffle workload and helps avoid skew (some partitions being much larger than others).
  • Broadcast Joins:
    • The large spark.sql.broadcastTimeout ensures that broadcast joins will not fail due to timeout, even for very large datasets.
    • Broadcast joins will occur automatically for tables smaller than 100 MB.

Key Considerations:

  • Memory Overhead: The extra 2 GB for memory overhead per executor is crucial for handling large shuffles and avoiding memory issues during stages like join, shuffle, or aggregation.
  • Dynamic Allocation: This configuration ensures that executors are scaled up or down based on workload, so you won’t unnecessarily consume resources when there is no work, while also providing enough resources to handle large workloads dynamically.

How Many Tasks in Total?

With this setup, the initial number of tasks that can run in parallel is:

  • 10 executors × 4 cores per executor = 40 tasks running concurrently.

With dynamic allocation:

  • The maximum number of tasks will be:
    • 15 executors × 4 cores per executor = 60 tasks running concurrently.

The Doubt — How many Worker nodes are needed for above configuration

To determine how many systems (worker nodes) are needed for your Spark job, you need to consider the total resource requirements for executors, cores, and memory across all nodes, as well as the resources available on each individual system (worker node).

Let’s break it down:

Total Resource Requirements Based on Your Configuration:

  1. Initial Executors: 10 executors.
  2. Max Executors (with dynamic allocation): 15 executors.
  3. Executor Cores: 4 cores per executor.
  4. Executor Memory: 16 GB of memory per executor (plus 2 GB for overhead, so 18 GB total per executor).
  5. Driver Memory: 16 GB of memory (plus 2 GB for overhead, so 18 GB total for the driver).

How to Calculate the Number of Worker Nodes Needed:

You need to know:

  1. Available CPU cores per system (worker node).
  2. Available memory per system (worker node).

Let’s assume a typical worker node has the following resources:

  • Cores per Worker Node: 16 cores.
  • Memory per Worker Node: 64 GB of memory.
1. CPU Core Calculation:
  • Total CPU cores required (for 15 executors max):
    • 15 executors×4 cores per executor=60 total cores requiredtext{15 executors} times text{4 cores per executor} = text{60 total cores required}15 executors×4 cores per executor=60 total cores required.
  • If each worker node has 16 cores, you can fit 4 executors per worker node (since 16 cores per node÷4 cores per executor=4 executors per nodetext{16 cores per node} div 4 text{ cores per executor} = 4 text{ executors per node}16 cores per node÷4 cores per executor=4 executors per node).
2. Memory Calculation:
  • Total memory required per executor:
    • 16 GB executor memory+2GBoverhead=18GB per executortext{16 GB executor memory} + 2 GB overhead = 18 GB text{ per executor}16 GB executor memory+2GBoverhead=18GB per executor.
  • On a worker node with 64 GB memory, you can fit:
    • 64 GB÷18 GB per executor=3executors per nodetext{64 GB} div text{18 GB per executor} = 3 executors text{ per node}64 GB÷18 GB per executor=3executors per node.

How Many Executors Per Node?

  • Memory is the limiting factor here: Based on the available memory per node (64 GB), each worker node can fit 3 executors.

How Many Nodes Are Needed?

  • If each worker node can fit 3 executors, and you need a maximum of 15 executors (based on your dynamic allocation setting), you would need:
    • 15 executors÷3 executors per node=5 worker nodestext{15 executors} div 3 text{ executors per node} = 5 text{ worker nodes}15 executors÷3 executors per node=5 worker nodes.

Driver Node Consideration:

  • The driver node will also need resources. Since the driver needs 16 GB memory plus 2 GB for overhead (18 GB total), you could either run the driver on a separate node or include it on a worker node if there are sufficient resources.

Based on the configuration and the assumed system specifications:

  • You will need 5 worker nodes to support the maximum of 15 executors.
  • Each worker node will have 3 executors, with each executor using 4 cores and 18 GB of memory.

If your cluster has 64 GB memory and 16 cores per worker node, and you want to maximize the resources for this Spark job, 5 nodes should be sufficient to handle the job with dynamic allocation enabled.

So here assumption is all worker node has same configuration, can it be different?

worker nodes in a Spark cluster can have different configurations (in terms of CPU cores, memory, and storage), but there are some important considerations and trade-offs when dealing with heterogeneous nodes.

Key Considerations with Heterogeneous Worker Nodes:

  1. Task Distribution:
    • Spark’s default behavior assumes homogeneous nodes, meaning it will try to distribute tasks evenly across all executors.
    • If some nodes have more resources (CPU/memory), they may finish tasks faster than others, leading to imbalanced workloads or idle resources on more powerful nodes.
  2. Executor Allocation:
    • You can configure different executor sizes (cores and memory) for different nodes by manually adjusting the configurations or using a resource manager like YARN or Kubernetes.
    • Executors on nodes with more CPU/memory will be able to handle more tasks concurrently than executors on less powerful nodes.
  3. Resource Management:
    • If using YARN or Kubernetes, the resource manager can allocate different amounts of resources to different worker nodes. This can make it easier to handle heterogeneous nodes.
    • You will need to manually tune the configuration based on the available resources on each worker node.

Example Scenario with Heterogeneous Nodes:

Assume your cluster has the following worker nodes:

  1. Worker Node 1:
    • 16 CPU cores, 64 GB of memory.
  2. Worker Node 2:
    • 8 CPU cores, 32 GB of memory.
  3. Worker Node 3:
    • 24 CPU cores, 96 GB of memory.

How Spark Handles This:

  1. Executor Allocation:
    • If you allocate 4 cores and 16 GB memory per executor, the number of executors you can run on each node is different:
      • Worker Node 1 (16 cores, 64 GB): Can run 4 executors (each executor with 4 cores and 16 GB memory).
      • Worker Node 2 (8 cores, 32 GB): Can run 2 executors.
      • Worker Node 3 (24 cores, 96 GB): Can run 6 executors.
  2. Task Distribution:
    • By default, Spark will try to assign tasks evenly to all executors. However, if some nodes have fewer resources (e.g., Worker Node 2), they may struggle to keep up with nodes that have more resources, leading to inefficient task execution.
    • Spark dynamic allocation can help by scaling executors based on load, but there could still be some inefficiencies if one node is slower.

Managing Heterogeneous Worker Nodes in Spark:

  1. Custom Executor Configuration:
    • You can specify different configurations for executors on different nodes.
    • For instance, you can allocate smaller executors on nodes with fewer resources and larger executors on nodes with more resources. This is typically done using YARN resource management or Kubernetes.
  2. Tuning Executor and Task Configurations:
    • You may need to fine-tune the number of tasks per executor to optimize performance, especially if you have nodes with different amounts of CPU and memory.
    • Using spark.executor.cores and spark.executor.memory carefully will help ensure that nodes with fewer resources aren’t overloaded.
  3. Dynamic Allocation:
    • If you enable dynamic allocation, Spark will try to scale the number of executors dynamically based on the workload, which can help better utilize heterogeneous resources.
    • YARN or Kubernetes can help manage this dynamic scaling across different types of nodes.

Example Configuration:

# Assume you have nodes with different configurations
# Worker Node 1: 16 cores, 64 GB memory
# Worker Node 2: 8 cores, 32 GB memory
# Worker Node 3: 24 cores, 96 GB memory

# Setting default executor cores and memory, but YARN/Kubernetes will allocate based on available resources
--executor-cores 4
--executor-memory 16g
--conf spark.dynamicAllocation.enabled=true
--conf spark.dynamicAllocation.minExecutors=5
--conf spark.dynamicAllocation.maxExecutors=15
--conf spark.executor.memoryOverhead=2048
--conf spark.sql.shuffle.partitions=200

Advanced Tuning Options:

  1. YARN Resource Allocation:
    • In a YARN environment, you can specify different resources for each node using node-specific configurations.
    • YARN will allocate resources based on what’s available on each node.
  2. Kubernetes Resource Allocation:
    • In a Kubernetes environment, you can specify pod configurations to request different amounts of CPU and memory resources per node.
    • Spark on Kubernetes allows you to dynamically create executors with different resource configurations.

Final:

Yes, Spark can handle heterogeneous worker nodes, but it requires some tuning. The performance may not be optimal unless you carefully manage how executors and tasks are distributed. Using dynamic allocation and a resource manager like YARN or Kubernetes can help handle different node configurations effectively.

If you’re working with heterogeneous nodes, I recommend testing different configurations and monitoring task distribution and resource usage to ensure optimal performance.


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One response to “CPU Cores, executors, executor memory in pyspark- Explain Memory Management in Pyspark”

  1. Good Post but diagrams or chart wise explaining would have been better.

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